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2018

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Aligned Sub-Hierarchies: A Structure-Based Approach to the Cover Song Task, Katherine M. Kinnaird

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Red Fox Genome Assembly Identifies Genomic Regions Associated With Tame and Aggressive Behaviours, Anna V. Kukekova, Jennifer L. Johnson, Xueyan Xiang, Shaohong Feng, Shiping Liu, Halie M. Rando, Anastasiya V. Kharlamova, Yury Herbeck, Natalya A. Serdyukova, Zijun Xiong, Violetta Beklemischeva, Klaus Peter Koepfli, Rimma G. Gulevich, Anastasiya V. Vladimirova, Jessica P. Hekman, Polina L. Perelman, Aleksander S. Graphodatsky, Stephen J. O’Brien, Xu Wang, Andrew G. Clark, Gregory M. Acland, Lyudmila N. Trut, and Guojie Zhang

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Exploring Connections Between Primitive Decomposition of Natural Language and Hierarchical Planning, Jamie C. Macbeth and Mark Roberts

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Offline Signature Verification via Structural Methods: Graph Edit Distance and Inkball Models, Paul Maergner, Nicholas Howe, Kaspar Riesen, Rolf Ingold, and Andreas Fischer

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Edge-Unfolding Nearly Flat Convex Caps, Joseph O'Rourke

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Open Problems from CCCG 2017, Joseph O'Rourke

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Threadable Curves, Joseph O’Rourke and Emmely Rogers

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Accommodating Grief on Twitter: An Analysis of Expressions of Grief Among Gang Involved Youth on Twitter Using Qualitative Analysis and Natural Language Processing, Desmond Upton Patton, Jamie C. Macbeth, Sarita Schoenebeck, Katherine Shear, and Kathleen McKeown

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Construction of Red Fox Chromosomal Fragments from the Short-Read Genome Assembly, Halie M. Rando, Marta Farré, Michael P. Robson, Naomi B. Won, Jennifer L. Johnson, Ronak Buch, Estelle R. Bastounes, Xueyan Xiang, Shaohong Feng, Shiping Liu, Zijun Xiong, Jaebum Kim, Guojie Zhang, Lyudmila N. Trut, Denis M. Larkin, and Anna V. Kukekova

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How to Catch when Proxies Lie: Verifying the Physical Locations of Network Proxies with Active Geolocation, Zachary Weinberg, Shinyoung Cho, Nicolas Christin, Vyas Sekar, and Phillipa Gill

2017

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New Principles for Auxetic Periodic Design, Ciprian Borcea and Ileana Streinu

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Efficient pebble game algorithms engineered for protein rigidity applications, Mojtaba Nouri Bygi and Ileana Streinu

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Efficient pebble game algorithms engineered for protein rigidity applications, Mojtaba Nouri Bygi and Ileana Streinu

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A Churn for the Better: Localizing Censorship Using Network-Level Path Churn and Network Tomography, Shinyoung Cho, Abbas Razaghpanah, Rishab Nithyanand, and Phillipa Gill

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Toward Theoretical Techniques for Measuring the Use of Human Effort in Visual Analytic Systems, R. Jordan Crouser, Lyndsey Franklin, Alex Endert, and Kris Cook

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Retrospective on a Decade of Research in Visualization for Cybersecurity, R. Jordan Crouser, Erina Fukuda, and Subashini Sridhar

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Matching Multiple Rigid Domain Decompositions of Proteins, Emily Flynn and Ileana Streinu

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Matching Multiple Rigid Domain Decompositions of Proteins, Emily Flynn and Ileana Streinu

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Modeling and Reasoning with Changing Intentions: An Experiment, Alicia M. Grubb and Marsha Chechik

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Isolated Character Forms from Dated Syriac Manuscripts, Nicholas Howe, Minyue Dai, and Michael Penn

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Chronological Profiling for Paleography, Nicholas Howe and Stephanie Xie

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SIAM Data Mining "Brings It" to Annual Meeting, Jeremy Kepner, Sanjukta Bhowmick, Aydın Buluç, Rajmonda Caceres, R. Jordan Crouser, Vijay Gadepally, Ben Miller, and Jennifer Webster

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Angle-Monotone Paths in Non-Obtuse Triangulations, Anna Lubiw and Joseph O'Rourke

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Conceptual Primitive Decomposition for Knowledge Sharing via Natural Language, Jamie C. Macbeth

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Crowdsourcing a Parallel Corpus for Conceptual Analysis of Natural Language, Jamie C. Macbeth and Sandra Grandic

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Image Schemas and Conceptual Dependency Primitives: A Comparison, Jamie C. Macbeth, Dagmar Gromann, and Maria M. Hedblom

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Repairing Gaps in Kinari-2 for Large Scale Protein and Flexibility Analysis Applications, Magdalena Metlicka, Mojtaba Nouri Bygi, and Ileana Streinu

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Repairing Gaps in Kinari-2 for Large Scale Protein and Flexibility Analysis Applications, Magdalena Metlicka, Mojtaba Nouri Bygi, and Ileana Streinu

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Y-Chromosome Markers for the Red Fox, Halie M. Rando, Jeremy T. Stutchman, Estelle R. Bastounes, Jennifer L. Johnson, Carlos A. Driscoll, Christina S. Barr, Lyudmila N. Trut, Benjamin N. Sacks, and Anna V. Kukekova

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Runtime Coordinated Heterogeneous Tasks in Charm++, Michael P. Robson, Ronak Buch, and Laxmikant V. Kale

2016

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Automatically Processing Tweets from Gang-Involved Youth: Towards Detecting Loss and Aggression, Terra Blevins, Robert Kwiatkowski, Jamie C. Macbeth, Kathleen McKeown, Desmond Patton, and Owen Rambow

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Segmentation-Free Spotting of Cuneiform using Part-Structured Models, Bartosz Bogacz, Nicholas Howe, and Mara Mara

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Geometric Deformations of Sodalite Frameworks, Ciprian Borcea and Ileana Streinu

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Geodesic Universal Molecules, John C. Bowers and Ileana Streinu

Geodesic Universal Molecules, John C. Bowers and Ileana Streinu

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GenderMag: A Method for Evaluating Software’s Gender Inclusiveness, Margaret Burnett, Simone Stump, Jamie C. Macbeth, Stephann Makri, Laura Beckwith, Irwin Kwan, Anicia Peters, and William Jernigan

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VAST Challenge 2016: Streaming Visual Analytics, R. Jordan Crouser, Kristin Cook, John Fallon, Georges Grinstein, Kristin Liggett, Danko Nebesh, Mark A. Whiting, and Kirsten Whitley

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Mind the Gap: the Importance of Pluralistic Discourse in Computing for Mental Health, R. Jordan Crouser and Morganne Ray Crouser

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A Survey of Visual Analytics Tools for Effective Decision-Making, R. Jordan Crouser, Erina Fukuda, and Subashini Sridhar

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Beyond Detection: Investing in Practical and Theoretical Applications of Emotion + Visualization, R. Jordan Crouser, Lane Harrison, Daniel Afergan, and Evan M. Peck

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“Is This Cyberbullying or Not?”: Intertwining Computational Detection with Human Perception (A Case Study), Edward Dillon, Jamie C. Macbeth, Robin Kowalski, Elizabeth Whittaker, and Juan E. Gilbert

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Looking into the Crystal Ball: Requirements Evolution over Time, Alicia M. Grubb and Marsha Chechik

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GrowingLeaf: Supporting Requirements Evolution Over Time, Alicia M. Grubb, Gary Song, and Marsha Chechik

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Inkball Models as Features for Handwriting Recognition, Nicholas Howe, Andreas Fischer, and Baptiste Wicht

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Understanding Challenges and Tradeoffs in iStar Tool Development, Tong Li, Alicia M. Grubb, and Jennifer Horkoff

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The Coherence of Conceptual Primitives, Jamie C. Macbeth and Marydjina Barionnette

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Unfolding Convex Polyhedra via Radially Monotone Cut Trees, Joseph O'Rourke

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Using Natural Language Processing and Qualitative Analysis to Intervene in Gang Violence: A Collaboration Between Social Work Researchers and Data Scientists, Desmond Upton Patton, Kathleen McKeown, Owen Rambow, and Jamie C. Macbeth

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Deep Learning for Population Genetic Inference, Sara Sheehan and Yun S. Song

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Large scale rigidity-based flexibility analysis of biomolecules, Ileana Streinu

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Cyberbullying Detection with a Pronunciation Based Convolutional Neural Network, Xiang Zhang, Jonathan Tong, Nishant Vishwamitra, Elizabeth Whittaker, Joseph P. Mazer, Robin Kowalski, Hongxin Hu, Feng Luo, Jamie C. Macbeth, and Edward Dillon

2015

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Deforming Diamond, Ciprian Borcea and Ileana Streinu

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Expansive Periodic Mechanisms, Ciprian Borcea and Ileana Streinu

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Geometric Auxetics, Ciprian Borcea and Ileana Streinu

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Liftings and Stresses for Planar Periodic Frameworks, Ciprian Borcea and Ileana Streinu

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Periodic Body-And-Bar Frameworks, Ciprian Borcea, Ileana Streinu, and Shin-Ichi Tanigawa

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Lang’s Universal Molecule Algorithm, John C. Bowers and Ileana Streinu

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Global Pattern Search at Scale, R. Jordan Crouser, Matthew C. Schmidt, Stephen Kelley, Benjamin Miller, Daniel Hook, Lauren Edwards, Maja Milosavljevic, Elizabeth Michel, Elizabeth Ferme, Robert Carrington, and Albert I. Reuther

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Hypercube Unfoldings that Tile R3 and R2, Giovanna Diaz and Joseph O'Rourke

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Adding Temporal Intention Dynamics to Goal Modeling: A Position Paper, Alicia M. Grubb

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Inkball Models for Character Localization and Out-of-Vocabulary Word Spotting, Nicholas Howe

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A Character Style Library for Syriac Manuscripts, Nicholas Howe, Alice Yang, and Michael Penn

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Exploring Hierarchical Visualization Designs Using Phylogenetic Trees, Shaomeng Li, R. Jordan Crouser, Garth Griffin, Connor Gramazio, Hans-Jörg Schulz, Hank Childs, and Remco Chang

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Spiral Unfoldings of Convex Polyhedra, Joseph O'Rourke

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Manipulating and Controlling for Personality Effects on Visualization Tasks, Alvitta Ottley, R. Jordan Crouser, Caroline Ziemkiewicz, and Remco Chang

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To Fix or to Learn? How Production Bias Affects Developers’ Information Foraging during Debugging, David Piorkowski, Scott D. Fleming, Christopher Scaffidi, Margaret Burnett, Irwin Kwan, Austin Z. Henley, Jamie C. Macbeth, Charles Hill, and Amber Horvath

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VAST Challenge 2015: Mayhem at Dinofun World, Mark Whiting, Kristin Cook, Georges Grinstein, John Fallon, Kristen Liggett, Diane Staheli, and R. Jordan Crouser

Virtual Polytopes, G. Yu Panina and I. Streinu

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Virtual Polytopes, G. Yu Panina and I. Streinu

2014

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Continuously Flattening Polyhedra Using Straight Skeletons, Zachary Abel, Erik D. Demaine, Martin L. Demaine, Jin Ichi Itoh, Anna Lubiw, Chie Nara, and Joseph O'Rourke

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Parallel Programming with Migratable Objects: Charm++ in Practice, Bilge Acun, Abhishek Gupta, Nikhil Jain, Akhil Langer, Harshitha Menon, Eric Mikida, Xiang Ni, Michael Robson, Yanhua Sun, Ehsan Totoni, Lukasz Wesolowski, and Laxmikant Kale

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New and Improved Spanning Ratios for Yao Graphs, Luis Barba, Prosenjit Bose, Mirela Damian, Rolf Fagerberg, Wah Loon Keng, Joseph O'Rourke, André van Renssen, Perouz Taslakian, Sander Verdonschot, and Ge Xia

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Singularity Locus for the Endpoint Map of Serial Manipulators with Revolute Joints, Ciprian S. Borcea and Ileana Streinu

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Task Versus Vehicle-based Control Paradigms in Multiple Unmanned Vehicle Supervision by a Single Operator, Mary L. Cummings, Luca F. Bertuccelli, Jamie C. Macbeth, and Amit Surana

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Scaling the ISAM land surface model through parallelization of inter-component data transfer, Phil Miller, Michael Robson, Bassil El-Masri, Rahul Barman, Gengbin Zheng, Atul Jain, and Laxmikant Kalé

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Development of Curves on Polyhedra Via Conical Existence, Joseph OʼRourke and Costin Vîlcu

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Visualization Evaluation for Cyber Security: Trends and Future Directions, Diane Staheli, Tamara Yu, R. Jordan Crouser, Suresh Damodaran, Kevin Nam, David O'Gwynn, Lane Harrison, and Sean McKenna

2013

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Frameworks With Crystallographic Symmetry, Ciprian Borcea and Ileana Streinu

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Nucleation-Free 3D Rigidity, Jialong Cheng, Meera Sitharam, and Ileana Streinu

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Balancing Human and Machine Contributions in Human Computation Systems, R. Jordan Crouser, Alvitta Ottley, and Remco Chang

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Rigidity and Flexibility of Protein-Nucleic Acid Complexes, Emily Flynn, Filip Jagodzinski, Sharon Pamela Santana, and Ileana Streinu

Rigidity and Flexibility of Protein-Nucleic Acid Complexes, Emily Flynn, Filip Jagodzinski, Sharon Pamela Santana, and Ileana Streinu

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Towards Accurate Modeling of Noncovalent Interactions for Protein Rigidity Analysis, Naomi Fox and Ileana Streinu

Towards Accurate Modeling of Noncovalent Interactions for Protein Rigidity Analysis, Naomi Fox and Ileana Streinu

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Modeling the Impact of Operator Trust on Performance in Multiple Robot Control, Fei Gao, Andrew S. Clare, Jamie C. Macbeth, and M. L. Cummings

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Document Binarization with Automatic Parameter Tuning, Nicholas Howe

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Part-Structured Inkball Models for One-Shot Handwritten Word Spotting, Nicholas Howe

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Rigidity Analysis of Protein Biological Assemblies and Periodic Crystal Structures, Filip Jagodzinski, Pamela Clark, Jessica Grant, Tiffany Liu, Samantha Monastra, and Ileana Streinu

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Predicting application performance using supervised learning on communication features, Nikhil Jain, Abhinav Bhatele, Michael P. Robson, Todd Gamblin, and Laxmikant V. Kale

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A 2-Chain Can Interlock With an Open 10-Chain, Bin Lu, Joseph O'Rourke, and Jianyuan K. Zhong

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Script-Based Story Matching for Cyberbullying Prevention, Jamie Macbeth, Hanna Adeyema, Henry Lieberman, and Christopher Fry

2012

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Outerplanar Graphs and Delaunay Triangulations, Ashraful Alam, Igor Rivin, and Ileana Streinu

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π/2-Angle Yao Graphs are Spanners, Prosenjit Bose, Mirela Damian, Karim Douïeb, Joseph O'Rourke, Ben Seamone, Michiel Smid, and Stefanie Wuhrer

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Mixed-Initiative Strategies for Real-time Scheduling of Multiple Unmanned Vehicles, Andrew S. Clare, Jamie Macbeth, and Mary L. Cummings

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An Affordance-Based Framework for Human Computation and Human-Computer Collaboration, R. Jordan Crouser and Remco Chang

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Two Visualization Tools for Analyzing Agent-Based Simulations in Political Science, R. Jordan Crouser, Daniel Kee, Dong Jeong, and Remco Chang

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Towards Sequence-Based DNA Flexibility Analysis, Emily Flynn, Filip Jagodzinski, and Ileana Streinu

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Body-and-Cad Geometric Constraint Systems, Kirk Haller, Audrey Lee-St.john, Meera Sitharam, Ileana Streinu, and Neil White

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Source Unfoldings of Convex Polyhedra via Certain Closed Curves, Jin-ichi Itoh, Joseph O'Rourke, and Costin Vîlcu

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Using Rigidity Analysis to Probe Mutation-Induced Structural Changes in Proteins, Filip Jagodzinski, Jeanne Hardy, and Ileana Streinu